Yusuke Takahashi

Save action "Normalize date" truncates an end of a range of dates

3

### JabRef version Latest development branch build (please note build date below) ### Operating system Windows ### Details on version and operating system Windows 11 21H2 and JabRef 5.7--2022-06-13--d241606 ###...

Add a feature to makewindows that the initial window size and the initial step size can be specified. I need to get tiling windows representing rounded coordinates at some digits....

Fix an issue where makewindows with a genome option (-g) and a count option (-n) will always raise a warning of a zero length interval, which is appended by NewGenomeFile...

Loss of precision of parameters in a model file

7

Double precision floating-point number parameters in svm-train, such as gamma, are written to a model file in a format of `%g` by `svm_save_model` in svm.cpp. This causes loss of precision...

Support HDF5 outputs again

1

Hello, I noticed that the HDF5 output (--csv_h5) option in ipdSummary was removed at d5675a4efe03167d03d93864368067d1f99f34ae, but I could not find related discussion. I would like ipdSummary to support the HDF5...

Runtime error at the Usage steps: "ValueError: View table is out of the bounds of chromosomes in cooler."

1

Hello. I followed the Usage section in the README. Specifically, I cloned this repository and rewrote the following four lines in `config/config.yml` to point at my local hg38 files. https://github.com/open2c/quaich/blob/a50deb32968925d206c933e40a121506bcb63918/config/config.yml#L2-L5...