Henry Davidge

This is an interesting suggestion. This could make interoperability with VCF a bit awkward since the VCF header type would also change after splitting. cc @kianfar77 for thoughts. @Hoeze, I'm...

@karenfeng did we end up doing this one?

Thanks, this is a great suggestion!

@olesya13 Problem 1: I don't see this issue in your screenshots. Problem 2: Right now, the splitter only knows how to handle a few specific fields (GL, PL, GP, GT)...

@bbsun92 It looks like you're running into memory pressure because of the large number of phenotypes. In our tests, we typically use batches of 15-20 phenotypes for each run. Could...

Would providing a simple conversion between CPRA string ids and our current id representation be sufficient? Or is there something else that is necessary.

I'll see if I can fix this.

Closing since we don't have a reproduction

@Tabinda788 The fix is the same locally -- you need to install the maven library.

This is resolved now. @alartin Glow formerly depended on Hail only for interoperation between the two libraries -- converting between `DataFrame`s and Hail's representation. We've since removed this functionality. None...