Dan Handwerker
Dan Handwerker
### Summary As part of reviewing #358, I was looking at the resulting volumes. I noticed that a non-trivial number of voxels are masked out in #358 than in master....
Documentation to highlight situations or studies where multi-echo or tedana are specifically useful
### Summary Several developers discussed adding a section to the documentation that highlights situations or specific studies that demonstrate where multi-echo fMRI in general or specific methods have been shown...
### Summary As I'm doing a bit more code reviews for pull requests, I'm finding myself searching for the same things over & over and fumbling a bit. It would...
There are a several situations when someone would collect MRI noise scans by using a standard sequence but with no Radio Frequency excitation. These noise maps are particularly useful for...
Write code to automatically create a flow chart or other summary/visualization for a decision tree. This can also be used to make a run-specific visualization that shows how components were...
### Summary @jbteves @n-reddy and I are working on comparing results between branches. When we type `tedana --version` on the same branch we all get the same hash but different...
Our next dev call is Thursday, 9/15 at 5:00 PM CET / 11:00 AM EDT / 3:00PM UTC / 8:00 AM PST [Check your time here](https://www.timeanddate.com/worldclock/fixedtime.html?msg=tedana+dev+call+September+2022&iso=20220915T11&p1=263&ah=1). Agenda: https://docs.google.com/document/d/1cqQ0K3ECftI8i6KHNTc0HKpKuUnvQ3-Cn0z9ZDGB_iE/edit?usp=sharing https://nih.zoomgov.com/j/1612146326?pwd=ZzNORGM5bmZ5dmlkcFJ6Mzg1UDdGUT09 Meeting...
### Summary I was talking with @afni-rickr and he suggested detrending and possibly regressing out motion parameters before tedana. This would reduce the amount of variance tedana would need to...
### Summary I was just having a discussion with AFNI's @afni-rickr and @mrneont and a few others and the discussion of censoring within tedana came up. ### Additional Detail The...
Closes #929. While working on the decision tree modularization, we noticed that the tedana decision tree had a difference from the older MEICA decision tree. Components that used to be...