Gregor Sturm

Results 542 comments of Gregor Sturm

I'm currently in favor of creating a new module `scirpy.get` and using a single function that can be used for all columns: ```python ir.get.top_n(adata, "clonotype", n=10) ```

Since RTD now fully supports PR builds, it may be worth switching to that service: https://docs.readthedocs.io/en/stable/guides/autobuild-docs-for-pull-requests.html this also solves versioning of docs and having a separate `master` and `stable` documentation.

This will serve to redirect the old docs to the new one: https://docs.github.com/en/free-pro-team@latest/github/working-with-github-pages/creating-a-custom-404-page-for-your-github-pages-site and ```html The page been moved to {{THE_NEW_URL}} ```

After some tryouts I ran into the issue that RTD does not provide us with enough time and RAM to execute the tutorials. I considered [rtds-action](https://github.com/dfm/rtds-action) to execute the notebooks...

https://github.com/scverse/cookiecutter-scverse/issues/40 might be a better solution

Related #186 Related #247

In GitLab by @szabogtamas on Jan 24, 2020, 20:08 marked the task **What sequences to use (TCRA/B primary only?)** as completed

In GitLab by @szabogtamas on Jan 24, 2020, 20:08 marked the task **What sequences to use (TCRA/B primary only?)** as incomplete

In GitLab by @szabogtamas on Jan 24, 2020, 20:13 For sequence logos I would consider the primary alpha+beta only. The only exception is groups made with tcrdist maybe. Here, I...