Michael Chambers

Installing PerlIO::gzip failed

4

I'm installing LRSDAY-v1.7.1 on Ubuntu 22.04.2 LTS. Running `install_dependencies.sh` raises the error "! Installing PerlIO::gzip failed.", I've tried passing the --force flag into `misc/cpanm` but I still get the same...

added a picard .dict and bwa index files of the sample genome

1

adding some files that hung me up when running the snakemake workflow dna-seq-gatk-variant-calling, hope this will help other folks get up and running, but rules should probably be added that...