girdhar3

what exactly is this doing in back-end? tagMatrix

I want to calculate percentage of promoters in my peaks as total number of promoters in whole genome. I want to do this analysis for all other annotated regions. how...

My question is when you get the TXDB object which has a list of annotated TSS. How do you find the overlap of a peak with these regions? what is...

I am still confused with distancetoTSS values from annotation of peaks. if you allow minimum overlap of 1 bp. There are 4 possibilites of overlaps of peak region with transcript...