Gert Hulselmans

Results 446 comments of Gert Hulselmans

Polars has some support for Decimal now, but for now it still converts pyarrow decimals to float64 by default, but converting to decimal can be enabled with `POLARS_ACTIVATE_DECIMAL=1`: ```python In...

Or use the config option, instead of the environment variable: ```python pl.Config.activate_decimals(True) ```

Closing as it seems resolved now.

@sm-Fifteen This is now supported: ```python In [6]: grades.with_columns(pl.col("class").map_dict(class_subject, default="No Known Class").alias("class_code")) Out[6]: shape: (8, 5) ┌─────────┬─────────┬────────────┬──────────┬────────────────┐ │ student ┆ class ┆ test_score ┆ test_max ┆ class_code │ │ ---...

@sstadick Any plans to still implement ISA-L? There is python-isal that wraps the ISA-L code, which might help as inspiration as I seem to remember that the API is quite...

I would recommend that you fix your broken CSV files. Broken CSV files can silently corrupt your data. Pandas is also not working correctly with them (columns are shifted as...

Could you try the pySCENIC docker image? https://pyscenic.readthedocs.io/en/latest/installation.html#docker-podman

Each file has its ow sha1sum file now: ```bash wget https://resources.aertslab.org/cistarget/databases/old/mus_musculus/mm9/refseq_r70/mc9nr/region_based/mm9-regions-9species.all_regions.mc9nr.feather.sha1sum.txt sha1sum -c mm9-regions-9species.all_regions.mc9nr.feather.sha1sum.txt ```

Thanks for the pull request. It is solved in master now in a different way: eaf23eb1fdcaae79b273de56b374b71aa8afde5a

Fow at least now you will need to implement your own reader. You can try it with: https://docs.rs/calamine/latest/calamine