go-annotation
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geneontology
This repository hosts the tracker for issues pertaining to GO annotations.
* **PTHR ID & PTN node:** * PTHR18861 * PTN002705826 * **Sequences with problematic annotation (ID + gene/protein name):** * spd-5 (WBGene00004955) * **Type of Issue: Erroneous source or erroneous...
* **InterPro ID / label** IPR036549 https://www.pombase.org/gene_subset/interpro:IPR036549 * **Example sequences with problematic annotation (ID + gene/protein name):** https://www.pombase.org/gene/SPBC24C6.13 * **Description of issue** Unfortunate! The panther family seems to split, so...
The proposal has been made to obsolete GO:1900274 regulation of phospholipase C activity GO:1900275 negative regulation of phospholipase C activity GO:0010863 positive regulation of phospholipase C activity GO:0007202 activation of...
* **PTHR ID & PTN node:** PTN000305308 (PTHR12866) * **Sequences with problematic annotation (ID + gene/protein name):** human ATG3 and orthologs * **Type of Issue: Erroneous source or erroneous propagation,...
* **PTHR ID & PTN node:** GO:0016237 | microautophagy | IBA with PTN002244143 , S000003549 * **Sequences with problematic annotation (ID + gene/protein name):** https://www.pombase.org/gene/SPCC1322.14c * **Type of Issue: Erroneous...
Dear all, The proposal has been made to obsolete GO:0008746 NAD(P)+ transhydrogenase activity. see [https://github.com/geneontology/go-ontology/issues/27814. Experimental annotations that need to be reviewed are here: https://docs.google.com/spreadsheets/d/1K3WD0kGOAJgK_ypNR-aevrFN0oiDPrOxuaoe6K0_820/edit#gid=0 Impacted groups: EcoCyc 4 TAIR...
Dear all, The proposal has been made to obsolete GO:0198738 cell-cell signaling by wnt see https://github.com/geneontology/go-ontology/issues/26960 3 annotations left by complex portal to PMID:27214281 Suggest to replace by GO:0007166 cell...
Dear all, The proposal has been made to obsolete 'organic substance biosynthetic process' GO:1901576 'organic substance catabolic process' GO:1901575 'organic substance metabolic process' GO:0071704 'organic substance transport' GO:0071702 'response to...
Dear all, The proposal has been made to obsolete UBC13-UEV1A complex GO:0035370 see https://github.com/geneontology/go-ontology/issues/27697
Dear all, The proposal has been made to obsolete GO:0019008 molybdopterin synthase complex (replaced by GO:1990140). see https://github.com/geneontology/go-ontology/issues/27655 Experimental annotations that need to be reviewed are here: https://docs.google.com/spreadsheets/d/1huQfgPF9LyE-IsRUnITuhYJsu2Mn5S4DyLcfFIjPpA8/edit#gid=0 Impacted groups:...
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This repository hosts the tracker for issues pertaining to GO annotations.