IPR036549 "Cytochrome c oxidase, subunit VIb also matches coa6 assembly factor

[ValWood]

• InterPro ID / label

IPR036549 https://www.pombase.org/gene_subset/interpro:IPR036549

• Example sequences with problematic annotation (ID + gene/protein name):

https://www.pombase.org/gene/SPBC24C6.13

• Description of issue

Unfortunate!

The panther family seems to split, so maybe InterPor could use Panther here? PTHR47677 PANTHER CYTOCHROME C OXIDASE ASSEMBLY FACTOR 6 PTHR46281 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B IPR003213 Cytochrome c oxidase, subunit

[sarach06]

Hi Val, Thank you for highlighting this. IPR036549 is an Homologous superfamily entry which includes G3D and Superfamily signatures, so we can't do much other than updating the description, which I did. The PANTHER signatures are integrated in these InterPro entries: [https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003213/] for PTHR46281 and [https://www.ebi.ac.uk/interpro/entry/InterPro/IPR048281/] for PTHR47677. Hope this helps. Best wishes, Sara

[ValWood]

Could you remove respiratory chain complex IV (GO:0045277) because this is incorrect for Coa6

but you could add it instead to https://www.ebi.ac.uk/interpro/entry/InterPro/IPR003213/ which covers only the cytochrome oxidase subunit so the mapping isn't lost.

[sarach06]

Hi Val, Yes, forgot to say that the term was removed from that entry. I added it to IPR003213. Thanks for pointing this! Best wishes Sara