taxondna
taxondna copied to clipboard
gaurav
Taxonomy-aware DNA sequence processing toolkit
Currently, FASTA, NEXUS and TNT are the only options.
As reported: > When you select “Export sequences (one file per column)” and select Nexus file, the taxon names are always changed to being the species name instead of the...
Using the Java one sometimes causes this problem: > When you select “Export sequences (one file per column)”>Browse>New Folder>[Make new folder] the “Use this directory” button is usually greyed out...
Mainly because some of them are quite nice! - https://www.kmeverson.org/blog/easiest-way-to-concatenate-multiple-loci-into-a-single-nexus-file
I don't know if anybody actually needs DistaClusters, but if so, it's sitting in this branch until I get around to merging it into the main line.
The current javaApplicationStub no longer works for macOS. [jpackage](https://openjdk.java.net/jeps/392) was released with Java 16 as the official solution to this problem. Unfortunately, it doesn't appear to have built-in support for...
While opening SequenceMatrix on the OSX Catalina I got the message that we need to install Java SE6, yet it is impossible since there is a new version of Java...
MalAvi provides a FASTA file of aligned sequences on their website, which might be handy to use as a test dataset: http://mbio-serv2.mbioekol.lu.se/Malavi/fasta.html
hi, I first time to use Sequence Matrix and Species Identifier,but the program will say "loading XXXfile into memory.Sorry for the delay!" when I loading .fasta file. I had tried...
