tools-iuc

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Updating tools/pathview from version 1.34.0 to 1.42.0

2

Hello! This is an automated update of the following tool: **tools/pathview**. I created this PR because I think the tool's main dependency is out of date, i.e. there is a...

planemo-autoupdate

Updating tools/kallisto from version 0.48.0 to 0.51.1

4

Hello! This is an automated update of the following tool: **tools/kallisto**. I created this PR because I think the tool's main dependency is out of date, i.e. there is a...

planemo-autoupdate

Updating tools/isoformswitchanalyzer from version 1.20.0 to 2.2.0

2

Hello! This is an automated update of the following tool: **tools/isoformswitchanalyzer**. I created this PR because I think the tool's main dependency is out of date, i.e. there is a...

planemo-autoupdate

Updating tools/happy from version 0.3.14 to 0.3.15

2

Hello! This is an automated update of the following tool: **tools/happy**. I created this PR because I think the tool's main dependency is out of date, i.e. there is a...

planemo-autoupdate

FOR CONTRIBUTOR: * [ ] I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [ ] License permits unrestricted use (educational + commercial)...

bgruening

Update snapatac2 to version 2.8.0

1

FOR CONTRIBUTOR: * [x] I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [x] License permits unrestricted use (educational + commercial) * [...

nilchia

[WIP] Add CIAlign

1

### Tool details for CIAlign - **Name:** CIAlign - **Description:** CIAlign is a tool which performs various functions to clean, visualise and analyse a multiple sequence alignment (MSA). - **Homepage:**...

Smkingsize

…id region 'chr1 chr2', instead quotes each whitespace separated block and validates user input FOR CONTRIBUTOR: * [x] I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for...

bwlang

Add Gemma tool for genome wide association studies.

1

FOR CONTRIBUTOR: * [x] I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [x] License permits unrestricted use (educational + commercial) * [x]...

elmedjadjirayane

FOR CONTRIBUTOR: * [x] I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [x] License permits unrestricted use (educational + commercial) * [x]...

thaulagnon