Francisco Rodríguez-Algarra

I assume those violin plots (and potential statistical comparisons between them) should only be done on common positions, then? In other words, if you plotted every single methylation value obtained...

Thanks so much, Felix. Indeed, we have appended the rDNA sequence as a separate contig, and hard masked the potentially conflicting regions of the genome with Ns. I will try...

I used the same exact masking method we've used in the past for other organisms, and out of 134 samples only two appear to show this behaviour, so I don't...

Hi, I'm facing a similar issue with `mason_simulator` `2.0.9` only when I attempt to use a `vcf` file (with a single variant at the moment). It worked perfectly fine when...