feixiang1209

Is there any database we need to download?

13

### Description of feature I have tried to run with one sample. It seems Taxonomy classification (GTDB-Tk) didn't work. Could you please advise whether we need to download any database?...

mmseq2 with ncbi nr data base taxonamy issue

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Dear mmseq2 team I am trying to create taxonomy database for ncbi nr data base. First I downloaded nr.fa, taxdump and prot.accession2taxid. Then I ran the below commands mmseqs createdb...

Create GTDB DNA Taxonomy database in mmseq2

1

I would like to create a GTDB DNA Taxonomy database in mmseq2. However, in the manual, it can only create the GTDB aminoacid databas. Could you please advise how I...