pcaExplorer

pcaExplorer copied to clipboard

Multifactorial exploration -

11

 Hi guys, When trying to carry out a multifactorial exploration, I cannot select factors to compare, and I when I type them they disappear. Any help would be appreciated.

jamesthomas232

R script for multifactor exploration

1

Dear team, Thank you for developing such a useful package. I have used its web version for visualization of multiple PCAs, however, I can not use its multifactor exploration function...

mars188

Sample to sample distance heatmap not displaying

1

Hello, I am having trouble seeing the Sample to sample distance heatmap, and I loaded the dds and annotation files into the shiny app. All other tabs work perfectly, but...

lucaskbobadilla

Countmatrix and sample metadata table not uploading properly

7

Hi there I am trying to upload my own countmatrix and sample metadata table using the interactive version of the tool, but it doesn't seem to be reading my input...

Justin1609

array-based expression data + pcaExplorer

1

Hi, This may be a naive question, since I know `pcaExplorer` has been designed for RNA-seq data, but I am wondering...: would there be an easy way to use` pcaExplorer`...

guidohooiveld

figure margins to large?

1

 apparently my figure margins are to large. Is this because I dont have an annotation table, or because I have 136 samples with SRB numbers? Please advise.

J-Lye

Can't see the gene names

2

Hi there, Thank you for this useful tool. I was trying to get my head around this last night. Unfortunately, although I upload the right count matrix, metadata and annotation...

doctorasgr