Frank Bergmann

i dont find this converter really useful. For constant speciesReferences, after expanding initial assignments, the final value can already be retrieved readily. For non-constant stoichiometries i dont see the proposed...

How are you currently resolving elements with an sbml id to its value. Say a global parameter? In python you could just call `getElementBySId` on the model, and if it...

> IIUC, the problem is not extracting this information, the problem is that SBML.jl represents Reactions in a struct with fields for reactants and products. Each are described by a...

thanks for letting us know, i do suspect a swig issue here. We've encountered SWIG being needed in different versions for different target languages. We build python with SWIG 4.0.x,...

we are actually not maintainers of the ubuntu package. I'm not sure what we could do to help resolving the issue.

well the thing is no one knows how to build the docs ... we know mike had a system with the gnu make build, but i'm not sure how it...

The expat find script compiles against expat, to see whether further compile definitions are necessary to compile against it. I suppose we could skip those tests in case you already...

I'm not entirely sure why you need the `force` for the WITH_EXPAT / WITH_LIBXML entries. As they should have just been taken from the definitions if you have a new...

zconf indicates, that potentiall the zlib target is missing some adjustments for your usecase. tbh: i always prefered to have dependencies be built once, instead of all the time together...

LibSBML already provides a way to return alternative structures. So if you'd rather have a hashmap, you could get one as follows: * create a subclass from ElementFilter, with the...