Etienne Danis

icon company University of Colorado, Denver - Anschutz Medical Campus icon location Denver icon location I love data science!!!!

Results 4 comments of Etienne Danis

Colors of plotAvgProf

plotAvgProf(tagMatrixList, xlim=c(-1000, 1000), title = "Average profiles of your favorite ChIP peaks around the TSS") + scale_color_manual(values=c("blue", "red")) # If you have two conditions/lines

How to change the colour of plotAvgProf output?

plotAvgProf(tagMatrixList, xlim=c(-1000, 1000), title = "Average profiles of your favorite ChIP peaks around the TSS") + scale_color_manual(values=c("blue", "red")) # If you have two conditions/lines For one line and from black...

splitBam fragment sizes for nucleosome-free DNA

From what I read (Adey et al. Genome Biol. 2010), it looks like the Tn5 transposase cannot generate anything less than 38bp. So any fragment shorter than 38 bp should...

metAMOS INSTALL.py error

Hi Sergey, I installed python 2.7.14 in a conda environment, installed psutil 0.6.1 (had issues with psutil) and I got the same error message described above. The cython version coming...