Eraj Khokhar

Hi, When using bedtools coverage in "-s" mode to force strandedness, how does bedtools figure out strand information of the read? (-a .bed -b .bam) Would this command be able...

Hi - I am running stringtie after STAR (BAM file includes the XS tag): stringtie -o string_tie_test.gtf --rf -G ./Homo_sapiens.GRCh38.95.gtf -p 10 test.bam And then running gffcompare to compare the...