eolaniru

Results 5 comments of eolaniru

Add module bcftools/norm to sarek (in progress)

Here is a working version https://github.com/eolaniru/sarek/tree/bcftools-norm_patch

mulled biocontainer for vardict-java and htslib

ah, brilliant! thanks @nvnieuwk. Not sure where the args2 will go :)

vardictjava variant calling workflow

Hi @maxulysse I'm not sure I understand. Do you mean vardictjava module? I created a mulled container to combine it with htslib

vardictjava variant calling workflow

oh i see, I understand now. I've used seqera container. Is that acceptable? Otherwise, I can wait for when docker and singularity imgs are available - i've added it to...

vardictjava variant calling workflow

Thanks @FriederikeHanssen. Apologies for the delay, was away and just catching up on my emails. I'll action this shortly