Emzo de los Santos

question about custom alphabets

1

Hi, great program. I had a question about using the custom alphabet. What input does it accept? Does it still assume that it is a fasta like file? I'm interested...

multimer using mmseqs generated sequence alignments?

2

Hello, I'm trying to run openfold multimer inference on some fasta files I have. I've been using the collabfold databases to generate the sequence alignments as these are smaller than...

using foldcomp database with a foldseek search

1

I'm trying to use a foldcomp database (esmatlas_v2023_02) for a foldseek search. I downloaded following the instructions, when I try to use easy-search though I get this error: Input database...