Revisiting-PLMs

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Metal ion binding dataset

19

Hi there, Nice work! I have a question about the metal ion binding [dataset](https://github.com/elttaes/Revisiting-PLMs/tree/main/data/Metal%20Ion%20Binding) used in your paper. Could you let me know where do you get the original dataset?...

empyriumz

AF2 structure/embedding for Stability (Fitness) task is not available.

2

Hello, Interesting work. Could you provide the AF2 embedding for the 60,000+ sequences in the stability task? (the dataset from TAPE's github only contains the sequences) It would be even...

luwei0917

About datasets with AlphaFold on contact map prediction

5

Hello, quite great work you do. Recently I wanted to try your code on contact map prediction. I saw the link of ESMStructuralSplitDataset, but didn't find AlphaFold data. Can you...

YiningWang2