Erik Garrison

Hi Brad, In trying to run the test I hit a snag. The BAM file (https://github.com/chapmanb/bcbio.variation.plus/raw/master/test/data/ensemble/NA12878-10.bam) does not appear to exist, or the URL has changed. Could you please update...

Great, I've just downloaded them. On Fri, Jan 31, 2014 at 7:22 AM, Brad Chapman [email protected]: > Erik; > Sorry about this. I moved these over to another repository. The...

Glia needs to be in a directory in your PATH environment variable. This is a Unix level issue that you can resolve by putting the executable in an expected place...

@jollymrt let's continue this conversation here: https://github.com/vgteam/vg/issues/1823

Thanks for the catch. As a matter of current practice I'm making release tarballs that include the submodules. We can fix this repo, but... This is extremely old software that's...

Happy new year! How did you build this? Let's fix the problem. Is this happening during install? On Sat, Jan 2, 2021, 02:51 sunnycqcn wrote: > Hello developer, > I...

I am not familiar with how to update the library to be compatible. Does anyone have a suggestion?

Привет из ароматной Северной Америке! Что касается релизов, нет, это не нужно. Если вы раздражены, я раздражен. Давайте удалить его. Я принимаю ваш запрос тянуть, или я буду обрабатывать его...

The linear gap model in edyeet is probably not suitable for this target. If you apply it as part of pggb, with smoothxg afterwards, it should be fine. But directly...

Oh it's the same thing. I was just referring to the whole process. The seqwish graph is very "literal" in representing the raw alignments. That can make it hard to...