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About install edyeet!

Open sunnycqcn opened this issue 4 years ago • 14 comments

Hello developer, Happy new year! When I installed the edyeet, I met the error as following: -- Configuring done CMake Warning (dev) at src/common/wflign/deps/edlib/CMakeLists.txt:54 (add_library): Policy CMP0063 is not set: Honor visibility properties for all target types. Run "cmake --help-policy CMP0063" for policy details. Use the cmake_policy command to set the policy and suppress this warning.

Target "edlib" of type "STATIC_LIBRARY" has the following visibility properties set for CXX:

CXX_VISIBILITY_PRESET
VISIBILITY_INLINES_HIDDEN

For compatibility CMake is not honoring them for this target. This warning is for project developers. Use -Wno-dev to suppress it. ################################################ If you have some time, could you help me figure out this? Thanks, Fuyou

sunnycqcn avatar Dec 31 '20 18:12 sunnycqcn

Hello developer, I have figured out the problem above. However, I still met the error like this: /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp: In function 'void wflambda::counter_print_stats(FILE*, const wflambda::profiler_counter_t*, const wflambda::profiler_counter_t*, const char*)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:147:33: error: expected ')' before 'PRIu64' 147 | fprintf(stream," (samples=%" PRIu64 "G",num_samples/METRIC_FACTOR_1G); I think this error from your code. I am not sure which I should modified. Thanks, Fuyou

sunnycqcn avatar Jan 02 '21 01:01 sunnycqcn

Happy new year! How did you build this?

Let's fix the problem.

Is this happening during install?

On Sat, Jan 2, 2021, 02:51 sunnycqcn [email protected] wrote:

Hello developer, I have figured out the problem above. However, I still met the error like this: /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp: In function 'void wflambda::counter_print_stats(FILE*, const wflambda::profiler_counter_t*, const wflambda::profiler_counter_t*, const char*)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:147:33: error: expected ')' before 'PRIu64' 147 | fprintf(stream," (samples=%" PRIu64 "G",num_samples/METRIC_FACTOR_1G); I think this error from your code. I am not sure which I should modified. Thanks, Fuyou

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ekg avatar Jan 02 '21 08:01 ekg

Yes. It is intalling. Thanks, Fuyou

sunnycqcn avatar Jan 02 '21 14:01 sunnycqcn

Hello, These are all errors when I installed it. It looks like I met the C++ version problem. I used g++ version 9.3 under conda. But I can install well old version (v0.1). Setting warning flags -- Configuring done -- Generating done -- Build files have been written to: /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/build [ 2%] Building CXX object src/common/wflign/deps/edlib/CMakeFiles/edlib.dir/edlib/src/edlib.cpp.o [ 11%] Built target libwflign_static [ 26%] Building CXX object src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/system/profiler_timer.cpp.o [ 26%] Building CXX object src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/edit/edit_cigar.cpp.o [ 26%] Building CXX object src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/edit/edit_table.cpp.o [ 26%] Building CXX object src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/system/mm_allocator.cpp.o [ 26%] Building CXX object src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/system/profiler_counter.cpp.o /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp: In function 'void wflambda::timer_print(FILE*, const wflambda::profiler_timer_t*, const wflambda::profiler_timer_t*)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:125:24: error: expected ')' before 'PRIu64' 125 | fprintf(stream,"%7" PRIu64 " ns",total_time_ns); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:144:26: error: expected ')' before 'PRIu64' 144 | fprintf(stream," (%5" PRIu64 " Gcalls",num_calls/1000000000); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp: In function 'void wflambda::counter_print_stats(FILE*, const wflambda::profiler_counter_t*, const wflambda::profiler_counter_t*, const char*)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:147:33: error: expected ')' before 'PRIu64' 147 | fprintf(stream," (samples=%" PRIu64 "G",num_samples/METRIC_FACTOR_1G); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:146:26: error: expected ')' before 'PRIu64' 146 | fprintf(stream," (%5" PRIu64 " Mcalls",num_calls/1000000); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:149:33: error: expected ')' before 'PRIu64' 149 | fprintf(stream," (samples=%" PRIu64 "M",num_samples/METRIC_FACTOR_1M); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:148:26: error: expected ')' before 'PRIu64' 148 | fprintf(stream," (%5" PRIu64 " Kcalls",num_calls/1000); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:151:33: error: expected ')' before 'PRIu64' 151 | fprintf(stream," (samples=%" PRIu64 "K",num_samples/METRIC_FACTOR_1K); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:150:26: error: expected ')' before 'PRIu64' 150 | fprintf(stream," (%5" PRIu64 " calls",num_calls); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:153:33: error: expected ')' before 'PRIu64' 153 | fprintf(stream," (samples=%" PRIu64 "",num_samples); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp: In function 'void wflambda::mm_allocator_print_request(FILE*, wflambda::mm_allocator_request_t*, uint64_t, uint64_t)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:421:33: error: expected ')' before 'PRIu64' 421 | fprintf(stream," [#%03" PRIu64 "/%05" PRIu64 "\t%s\t@%08u\t(%" PRIu64 " Bytes)" | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:152:26: error: expected ')' before 'PRIu64' 152 | fprintf(stream," (%5" PRIu64 " call",num_calls); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:167:27: error: expected ')' before 'PRIu64' 167 | fprintf(stream,",%7" PRIu64 " ns/call",ns_per_call); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp: In function 'void wflambda::mm_allocator_print_requests(FILE*, wflambda::mm_allocator_t*, bool)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:457:55: error: expected ')' before 'PRIu64' 457 | fprintf(stream," [n/a\tFree] \t(%" PRIu64 " Bytes)\n",free_block); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:179:28: error: expected ')' before 'PRIu64' 179 | fprintf(stream," {min%" PRIu64 "ns",min_ns); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_timer.cpp:190:27: error: expected ')' before 'PRIu64' 190 | fprintf(stream,",Max%" PRIu64 "ns})\n",max_ns); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp: In function 'void wflambda::mm_allocator_print(FILE*, wflambda::mm_allocator_t*, bool)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:480:45: error: expected ')' before 'PRIu64' 480 | fprintf(stream," => Segments.allocated %" PRIu64 "\n",num_segments); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:481:42: error: expected ')' before 'PRIu64' 481 | fprintf(stream," => Segments.size %" PRIu64 " MB\n",segment_size/(1024*1024)); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:482:45: error: expected ')' before 'PRIu64' 482 | fprintf(stream," => Memory.available %" PRIu64 " MB\n",num_segments*(segment_size/(1024*1024))); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:486:38: error: expected ')' before 'PRIu64' 486 | fprintf(stream," => Memory.used %" PRIu64 "\n",bytes_used); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:487:38: error: expected ')' before 'PRIu64' 487 | fprintf(stream," => Memory.free %" PRIu64 "\n",bytes_free_available+bytes_free_fragmented); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:488:51: error: expected ')' before 'PRIu64' 488 | fprintf(stream," => Memory.free.available %" PRIu64 "\n",bytes_free_available); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/mm_allocator.cpp:489:51: error: expected ')' before 'PRIu64' 489 | fprintf(stream," => Memory.free.fragmented %" PRIu64 "\n",bytes_free_fragmented); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp: In function 'void wflambda::percentage_print(FILE*, const wflambda::profiler_counter_t*, const char*)': /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:274:33: error: expected ')' before 'PRIu64' 274 | fprintf(stream," (samples=%" PRIu64 "G",num_samples/METRIC_FACTOR_1G); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:276:33: error: expected ')' before 'PRIu64' 276 | fprintf(stream," (samples=%" PRIu64 "M",num_samples/METRIC_FACTOR_1M); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:278:33: error: expected ')' before 'PRIu64' 278 | fprintf(stream," (samples=%" PRIu64 "K",num_samples/METRIC_FACTOR_1K); | ~ ^~~~~~~ | ) /isilon/saskatoon-rdc/users/fuf/comDIR/edyeet/src/common/wflign/deps/wflambda/system/profiler_counter.cpp:280:33: error: expected ')' before 'PRIu64' 280 | fprintf(stream," (samples=%" PRIu64 "",num_samples); | ~ ^~~~~~~ | ) gmake[2]: *** [src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/system/profiler_timer.cpp.o] Error 1 gmake[2]: *** Waiting for unfinished jobs.... gmake[2]: *** [src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/system/mm_allocator.cpp.o] Error 1 gmake[2]: *** [src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/system/profiler_counter.cpp.o] Error 1 gmake[1]: *** [src/common/wflign/deps/wflambda/CMakeFiles/wflambda.dir/all] Error 2 gmake[1]: *** Waiting for unfinished jobs.... [ 29%] Linking CXX static library ../../../../../lib/libedlib.a [ 29%] Built target edlib gmake: *** [all] Error 2

sunnycqcn avatar Jan 02 '21 15:01 sunnycqcn

Hello,

I have similar problem when I try to install edyeet. I have the following error messages:

s1060627@usrelhpc02:[~/edyeet-0.3]> module load cmake/3.20.0
s1060627@usrelhpc02:[~/edyeet-0.3]> cmake -H. -Bbuild && cmake --build build -- -j 16
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Setting warning flags
-- Performing Test WOLD_STYLE_CAST
-- Performing Test WOLD_STYLE_CAST - Success
-- Performing Test WSHADOW
-- Performing Test WSHADOW - Success
-- Configuring done
CMake Error in CMakeLists.txt:
  Target "edyeet" requires the language dialect "CXX17" , but CMake does not
  know the compile flags to use to enable it.


CMake Error in src/common/wflign/CMakeLists.txt:
  Target "libwflign_static" requires the language dialect "CXX17" , but CMake
  does not know the compile flags to use to enable it.


CMake Error in src/common/wflign/CMakeLists.txt:
  Target "wflign" requires the language dialect "CXX17" , but CMake does not
  know the compile flags to use to enable it.


CMake Warning (dev) at src/common/wflign/deps/edlib/CMakeLists.txt:54 (add_library):
  Policy CMP0063 is not set: Honor visibility properties for all target
  types.  Run "cmake --help-policy CMP0063" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  Target "edlib" of type "STATIC_LIBRARY" has the following visibility
  properties set for CXX:

    CXX_VISIBILITY_PRESET
    VISIBILITY_INLINES_HIDDEN

  For compatibility CMake is not honoring them for this target.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Generating done
CMake Generate step failed.  Build files cannot be regenerated correctly.

I have tried to set the policy to NEW as suggested but I got this:

s1060627@usrelhpc02:[~/edyeet-0.3]> cmake_policy(SET CMP0063 NEW)
-bash: syntax error near unexpected token `SET'

Do you have an idea how to solve this issue? Thank you very much in advance

Have a great day Cheers C.

cmonat avatar Apr 08 '21 06:04 cmonat

Hi @cmonat Is your CMake version up to date? https://stackoverflow.com/questions/47238577/target-requires-the-language-dialect-cxx17-with-compiler-extensions-but-cma states that an older CMake version than 3.8 is not compatible with CXX17.

Best, Simon

subwaystation avatar Apr 08 '21 08:04 subwaystation

Hi @subwaystation I'm using the CMake version 3.20.0 so it should be compatible with CXX17 right ?

Thanks C.

cmonat avatar Apr 08 '21 08:04 cmonat

I am using the same version, so this is not the issue. What gcc and g++ versions do you have?

subwaystation avatar Apr 08 '21 08:04 subwaystation

Whoops, it says right there GNU 4.8.5. This is too old. At least GCC 9.3 is required. Better 10.2.

subwaystation avatar Apr 08 '21 08:04 subwaystation

Ok thanks, I'll try with GCC 10.2.

cmonat avatar Apr 08 '21 09:04 cmonat

Hello,

I have retried with both cmake 3.20 and gcc 10.2 but I still got the following error message and have no idea how to solve it, somebody have an idea?

s1060627@usrelhpc02:[~/edyeet-0.3]> cmake -H. -Bbuild && cmake --build build -- -j 16
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Setting warning flags
-- Performing Test WOLD_STYLE_CAST
-- Performing Test WOLD_STYLE_CAST - Success
-- Performing Test WSHADOW
-- Performing Test WSHADOW - Success
-- Configuring done
CMake Error in CMakeLists.txt:
  Target "edyeet" requires the language dialect "CXX17" , but CMake does not
  know the compile flags to use to enable it.


CMake Error in src/common/wflign/CMakeLists.txt:
  Target "libwflign_static" requires the language dialect "CXX17" , but CMake
  does not know the compile flags to use to enable it.


CMake Error in src/common/wflign/CMakeLists.txt:
  Target "wflign" requires the language dialect "CXX17" , but CMake does not
  know the compile flags to use to enable it.


CMake Warning (dev) at src/common/wflign/deps/edlib/CMakeLists.txt:54 (add_library):
  Policy CMP0063 is not set: Honor visibility properties for all target
  types.  Run "cmake --help-policy CMP0063" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  Target "edlib" of type "STATIC_LIBRARY" has the following visibility
  properties set for CXX:

    CXX_VISIBILITY_PRESET
    VISIBILITY_INLINES_HIDDEN

  For compatibility CMake is not honoring them for this target.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Generating done
CMake Generate step failed.  Build files cannot be regenerated correctly.

Thanks in advance Have a great day C.

cmonat avatar Apr 09 '21 12:04 cmonat

Hi @cmonat The output of your error message still says that CMake is working with GNU 4.8.5. Please fix this. Then it should compile. Best, Simon

subwaystation avatar Apr 09 '21 13:04 subwaystation

Hi again,

sorry for the delay, I ask for help to the IT service and I did the following to make it work for me:

s1060627@usrelhpc02:[~]> cd edyeet-0.3/
s1060627@usrelhpc02:[~/edyeet-0.3]> ls
bin  build  CMakeCache.txt  CMakeFiles  cmake_install.cmake  CMakeLists.txt  lib  LICENSE  Makefile  README.md  scripts  src
s1060627@usrelhpc02:[~/edyeet-0.3]> rm -rf build/
s1060627@usrelhpc02:[~/edyeet-0.3]> ls
bin  CMakeCache.txt  CMakeFiles  cmake_install.cmake  CMakeLists.txt  lib  LICENSE  Makefile  README.md  scripts  src
s1060627@usrelhpc02:[~/edyeet-0.3]> module load cmake/3.20.0
s1060627@usrelhpc02:[~/edyeet-0.3]> module load gcc/10.2.0
s1060627@usrelhpc02:[~/edyeet-0.3]> export CC=`which gcc`
s1060627@usrelhpc02:[~/edyeet-0.3]> export CXX=`which g++`
s1060627@usrelhpc02:[~/edyeet-0.3]> cmake -H. -Bbuild && cmake --build build -- -j 16

Thanks for your help Have a great day Best, C.

cmonat avatar Apr 13 '21 16:04 cmonat

Happy to hear that. Thanks for sharing your solution!

subwaystation avatar Apr 13 '21 20:04 subwaystation