Erik Garrison
I had some difficulty with the C++ API. In my case the key issue seemed to be the initialization of the reduction parameter. For the time being I'm using the...
https://github.com/vcflib/vcflib/blob/master/src/Variant.cpp#L2158 from here Let us know if this fixes what you're seeing. On Wed, Apr 20, 2022, 14:07 Armin Töpfer ***@***.***> wrote: > Another UB hit > > SUMMARY: UndefinedBehaviorSanitizer:...
We should at least raise an error. On Wed, Mar 8, 2017, 9:58 PM Jordan Eizenga wrote: > If you build an XG from an existing Graph whose Paths are...
How many paths are in your tiny graph? Is there a test case we could attach?
@adamnovak's implementation of succinct threads is a preferable way to do this. Construction is still linear in the number of threads, which isn't ideal, but it will help a lot...
I would suggest GFAv1. v1.1 adds a second path type for metadata on paths that seems relevant haplotype panels. This breaks most existing tools for no general benefit. On Thu,...
I did not solve it. On Thu, Apr 6, 2023, 11:45 ywxue00 ***@***.***> wrote: > @ekg Hello, how did this error of yours finally > solve, I also encountered the...
> Also in the preceding mail context, even if we consider sub graph, yet the node-ids will be unique right ? Since in vg, a node-id never repeats so whatever...
I get a different image but the same thing is happening to me. I'm on chromium 48 on Ubuntu 15.10.
wfmash can produce BAM on top of mashmap's homology maps. On Sun, Nov 19, 2023, 13:04 Bryce Kille ***@***.***> wrote: > Hi @SAMtoBAM , > > You may be interested...