Egon Willighagen

When browsing the content of these files, I ran into this line with what it seems to me a typo: https://github.com/petermr/CEVOpen/blob/master/dictionary/TargetOrganism.xml#L22

Mmm... I actually just now notice that [this notebook](https://colab.research.google.com/github/egonw/chempyformatics/blob/main/docs/nb/ReadSMILES.ipynb) does not have problems and also loads from Maven Central (but using the old API).

The following command (which underlies the resolving, I guess) works for me locally: ```shell /usr/bin/mvn -B -f /home/egonw/var/Projects/hub/bacting/managers-cheminfo/net.bioclipse.managers.inchi/pom.xml dependency:resolve ```

Okay, problem is elsewhere (finally found it): https://github.com/eclipse-equinox/equinox.bundles/issues/54

Okay, I now depend on the latest Eclipse bundles which should depend on the fixed equinox library, but the the wrong version is tried by ScyJava: https://github.com/cthoyt/pybacting/issues/11 Help most welcome....

@imagejan, I will test.

Yes, I still seem to have similar problems, but the equinox one seems to be solved. I find it really hard to debug. The latest (failing) PR is here: https://github.com/cthoyt/pybacting/pull/12...

OK, cool. When you say that "only the mapping based extractor..." is supported, that means all in this file: https://raw.github.com/dbpedia/extraction-framework/live/mappings/Mapping_en.xml Right? And can I also run that "extract" script locally...

OK, got it. That's not an easy fix, I assume...

"It would be an easy fix:"... oh, then please enable processing the Chembox_Identifiers... we'll see from the existing mappings if that works, and then I could simply focus on the...