Dženan Zukić

Results 74 issues of Dženan Zukić

### Description Currently, the test image and its regression baseline must have the exact same size, as per: https://github.com/InsightSoftwareConsortium/ITK/blob/e41c4583c03c45fda7334111041aabb4b74e8465/Modules/Core/TestKernel/src/itkTestDriverInclude.cxx#L508-L514 Which causes this sort of failure: ```log The size of the...

type:Enhancement

This data is not used, so it is better to have a lighter-weight char, instead of the heavier `PointType` there. Having `PointType` there might also confuse someone into thinking that...

type:Enhancement
area:Core

## PR Checklist - [x] No [API changes](https://github.com/InsightSoftwareConsortium/ITK/blob/master/CONTRIBUTING.md#breaking-changes) were made (or the changes have been approved) - [x] No [major design changes](https://github.com/InsightSoftwareConsortium/ITK/blob/master/CONTRIBUTING.md#design-changes) were made (or the changes have been approved)

area:Core

I have corresponding fiducial points between a pair of images. I use it to compute similarity transform. What is the best way to pass this as initial transform? See #245...

```py elastix_object = itk.ElastixRegistrationMethod.New(fixed_image, moving_image) elastix_object.SetExternalInitialTransform(initial_transform) ... comb_transform = elastix_object.GetCombinationTransform() itk_transform = elastix_object.ConvertToItkTransform(comb_transform) # error ``` produces: ```log RuntimeError: D:\a\im\_skbuild\win-amd64-3.9\cmake-build\_deps\elx-src\Core\Main\itkElastixRegistrationMethod.hxx:1019: ITK ERROR: Failed to convert transform object SimilarityTransformElastix (000001A9A7B0E0B0) RTTI...

```py import itk parameter_object = itk.ParameterObject.New() ``` produces: ```text Traceback (most recent call last): File "C:\Dev\ITK-py\Wrapping\Generators\Python\itk\support\lazy.py", line 137, in __getattribute__ base.itk_load_swig_module(module, namespace) File "C:\Dev\ITK-py\Wrapping\Generators\Python\itk\support\base.py", line 110, in itk_load_swig_module l_module =...

https://xtensor-zarr.readthedocs.io/en/latest/basic_usage.html and https://github.com/xtensor-stack/xtensor-zarr/blob/master/README.md#usage are in sync with each other, but in significant dissonance with the code. [Create an array](https://xtensor-zarr.readthedocs.io/en/latest/basic_usage.html#create-an-array) example fails to compile with: ```text 9>itkOMEZarrNGFFImageIOTest.cxx 9>C:\Dev\ITKIOOMEZarrNGFF\test\itkOMEZarrNGFFImageIOTest.cxx(50,21): error C2672: 'xt::xzarr_hierarchy::create_array':...

The error was: ```text CMake Error at C:/Libs/xtl-vs19/xtlConfig.cmake:26 (message): File or directory C://include referenced by variable xtensor_zarr_INCLUDE_DIRS does not exist ! Call Stack (most recent call first): C:/Libs/xtensor-zarr-vs19/xtensor-zarrConfig.cmake:49 (set_and_check) CMakeLists.txt:6...

CI is broken. In a pull request #54, excerpt from the [build log](https://dev.azure.com/xtensor-stack/xtensor-stack/_build/results?buildId=4230&view=logs&j=6f6950ed-118e-5110-b7d1-309d986feacb&t=26dd8b2e-22bc-5158-33fc-bbdbd2b09255&l=34): ```text /usr/share/miniconda/envs/xtensor-zarr/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: warning: libnsl.so.1, needed by /usr/share/miniconda/envs/xtensor-zarr/lib/libxerces-c-3.2.so, not found (try using -rpath or -rpath-link) /usr/share/miniconda/envs/xtensor-zarr/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /usr/share/miniconda/envs/xtensor-zarr/lib/libpq.so.5: undefined...