Dženan Zukić

icon indicating a website link https://www.kitware.com/dzenan-zukic/ icon indicating an email [email protected]

icon company @KitwareMedical icon location Carrboro, NC, USA icon location Staff R&D Engineer @ Kitware. Dealing with image analysis, deep learning, 3D space manipulation, surgical guidance, etc.

Results 653 comments of Dženan Zukić

Validate learning instructions

@hjmjohnson take a look

Use MRIQC or MRQy to establish classical image quality metrics

See old an issue in the old repository: https://github.com/OpenImaging/miqa-phase1/issues/34

Initial Issues Encountered While Setting Up miqa

I remember that some component didn't work with Python newer than 3.7 (I originally tried it with 3.8). If you are interested in doing development on Windows, I could update...

Initial Issues Encountered While Setting Up miqa

Updated instructions (part of #54 and #52) are here: https://github.com/dzenanz/miqa/blob/with_learning-rebase/development.md

With learning rebase

I don't have a strong preference. Do what you think is easier or better 😄 Or wait for Curt's opinion.

With learning rebase

NN classifier seems to be working on my computer. Can you check my work in #54?

With learning rebase

I didn't want to impose on your branch. You can cherry pick commits from my branch.

Addition of:

Perhaps rename this PR to `SPADENet` or `SPADENet (VAE-GAN)`? The current name, `Addition of:`, is quite non-descriptive.

Target cuda 11.7/11.8

I don't think we are dependent on CUDA versions.

The example BasicRegionGrowing fails to compile

TL;DR This example is broken. This example [isn't enabled](https://github.com/InsightSoftwareConsortium/ITKSphinxExamples/blob/v5.2.0/src/Segmentation/KLMRegionGrowing/CMakeLists.txt) when I configure the whole repository. The likely reason is that it doesn't build, and from the looks of git history...