Dženan Zukić

Here is a WIP branch which I uses Elastix's ability to load ITK transform from a file: https://github.com/dzenanz/HASI/commit/f5ebf57864f991716a2f0076e0ee4ea4816c4129.

A lot of work seems to have been done last year regarding this. What it the latest update here?

ITK transforms operate in physical space. As such, they are unrelated to spacing or size of any particular image.

> Can we transfer points in moving image to the fixed image domain ? Of course, direct application of the transform should give you that. > How to do the...

@JohanMabille or @davidbrochart, can you comment on [CI failure](https://dev.azure.com/xtensor-stack/xtensor-stack/_build/results?buildId=4263&view=logs&j=6f6950ed-118e-5110-b7d1-309d986feacb&t=26dd8b2e-22bc-5158-33fc-bbdbd2b09255&l=34)? ```text /usr/share/miniconda/envs/xtensor-zarr/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: warning: libnsl.so.1, needed by /usr/share/miniconda/envs/xtensor-zarr/lib/libxerces-c-3.2.so, not found (try using -rpath or -rpath-link) /usr/share/miniconda/envs/xtensor-zarr/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /usr/share/miniconda/envs/xtensor-zarr/lib/libpq.so.5: undefined reference to `memcpy@GLIBC_2.14' collect2:...

```text ==> Removing Homebrew installation... /usr/local/share/info/dir: Permission denied /usr/local/share/info/dir: Permission denied ... /usr/local/share/info/dir: Permission denied ``` This seems to be a waste of time.

It is here: https://github.com/gulrak/filesystem. But it is not a direct dependency of this repo, but of something else in `xtensor-stack`.

I am working on ITK IO for zarr (specifically, OME-NGFF). Initially, I used xtensor-zarr ([PR6](https://github.com/InsightSoftwareConsortium/ITKIOOMEZarrNGFF/pull/6)), but then [realized](https://github.com/InsightSoftwareConsortium/ITKIOOMEZarrNGFF/pull/6/commits/8cd80bda79dbe5121eb62b6ae7a94d57b23dbfc9) that `xtensor-zarr` only supports some version of zarr v3 draft. I then...

I guess it is more general netCDF building. More specifically difficulty of integrating it into another library via CMake.

Here are some issues I opened there: https://github.com/Unidata/netcdf-c/issues?q=is%3Aissue+sort%3Aupdated-desc+author%3Adzenanz+ [This one](https://github.com/Unidata/netcdf-c/issues/2474) is zarr-specific.