Daniel Vera

sesameDataCache() ExperimentHub Caching fails

11

> library(sesame) Loading required package: sesameData Loading required package: ExperimentHub Loading required package: BiocGenerics Attaching package: ‘BiocGenerics’ The following objects are masked from ‘package:stats’: IQR, mad, sd, var, xtabs The...

clodius aggregate: NameError: global name '_bigwig' is not defined

9

On ubuntu xenial with a fresh python 2.7.12 install, I get the following: ```bash root@609c5b8e4115:/$ clodius aggregate bigwig HistonH3_cre_trt_rep1.bw /usr/local/lib/python2.7/dist-packages/h5py/__init__.py:36: FutureWarning: Conversion of the second argument of issubdtype from `float`...

Getting callback URL mismiatch. Running shiny app behind nginx which also handles ssl auth0 callback URL contains ``` https://.. ``` `_auth0.yml` ``` name: app remote_url: 'https://..' auth0_config: api_url: 'https://.us.auth0.com' credentials:...

bcftools consensus: Making a chain file to convert coordinates BACK to input reference

4

Currently, bcftools consensus creates a chain file to convert coordinates from the reference to the newly-created consensus. It would be great if the directionality of the chain was documented, as...