drivenbyentropy

Interesting. Could you please provide me with the java version you are using, as well as the AptaSuite version for which this issues occurs?

Hi! I am not using your platform but maybe issue #106 could be related to your concern. That being said, if your goal is to use AptaSuite without any code...

Hi, Could you please describe how you are exporting the data? I believe you might be missing a step to instruct AptaSuite to write the sequences to disk in the...

Hi, I assume you are running this in command line mode. In this case, you might be missing the appropriate configuration file options related to AptaCluster. Specifically, you might need...

Thank you for reporting this. I will have a look as soon as my schedule opens up.

Great idea, I will see to adding this in a future release.

Hey, you are absolutely correct, `AptaCluster` should only take the randomized region into account. This was indeed the case with the reference implementation of the original paper and I was...