dosshra
dosshra
Hello I am trying to use minimap to align genome assembly to a reference genome. Since the genome is very large, (~10GB) I have split the new genome assembly to...
I wonder if it is possible to export the counts for each kmer and each sample to a csv/tsv file so it can be used for other analysis such as...
Hello I merged two files using this code: `gffcompare -i ~/wewano/list` In the results gff file, the order of the features is not always following the coordinates. See below: `Chr1A...
Hello. I plan to use LDhat to estimate recombination rate along the chromosomes wild wheat which is a selfer species. The data is composed of ~400 genotypes sampled from ~100...
Hello Since the process of generating hash PA matrix is expected to take less disk space, is it possible to generate hash:pa matrix and then to convert, it as a...
running: `kmtricks pipeline --file fof2 --run-dir ./kmer_pa --kmer-size 31 --mode kmer:pa:text -t 10` I get: > Killed after receive Segmentation fault:SIGSEGV(11) signal running 120 samples, 420 read files (~14GB each)...