Ding He

Hi @ndierckx, I came across the same issue! Could you have a look of my read format? I've tried various edits but still got the same "Incorrect File Format" complain....

> @dinhe878 > Are those illumina reads? > How can you link the paired reads, because only one of the 3 pairs having matching IDs? > And can you send...

Not sure if this is the right place to ask but could I ask what ASR url should I provide in the plugin setting? I tried hosting a docker run...

So I ended up just search all my fna files against my custom krakenDB separately and concatenate them, like `kraken2 --threads=40 --db=. ./library/viral/*.fna > database.kraken` `kraken2 --threads=40 --db=. ./library/added/*.fna >>...