David Gault

Hi Félix, If possible would you be able to upload the file that is causing the error for testing? You can upload the image at https://www.openmicroscopy.org/qa2/qa/upload/ With Thanks, David Gault

Hi Félix, Thank you for submitting the file. I can certainly reproduce the same issue that you are seeing. From debugging the tile dimensions within the JPEG decoder appear to...

Hi @usuyama, this particular issue is still present but most ndpi files should be unaffected and convert without problem. Are you seeing the same exception with the stack trace below?...

Hi @nessj216, thank you for reporting the issue. Are you able to provide a link to the sample file that we can test? Are you seeing this problem with all...

Thanks @nessj216, I tested the sample files with MATLAB_R2017b and Bio-Formats 6.9.0 and was not able to reproduce the same error as the files could be read and opened as...

Hi @manerotoni, thank you opening the issue and providing a sample file. Does this affect all your ND2 files? Have you made any recent updates to NIS-elements or made any...

A further report of the same issue can be found on https://forum.image.sc/t/nd2-metadata-and-import-issues/40699/2

From imagesc message: In TiffSaver.java the function writeIFD() loops over IFD keys in ``` for (Integer key : keys) { if (key.equals(IFD.LITTLE_ENDIAN) || key.equals(IFD.BIG_TIFF) || key.equals(IFD.REUSE)) continue; Object value =...

Tested by converting the below public datasets, each run 5 times and averaged (time in seconds): | Dataset | With 6.6.1 | With PR | | ------------- | ------------- |...

Pushing this to 6.8.0 to continue testing in order to better understand the impact of the changes across a variety of datasets