Dereje Jima

Using sshfs-static-leopard instead of sshfs

2

Using "./Contents/Resources/sshfs-static-leopard " instead of /usr/local/bin/sshfs unable to edit the code in the gui text area (uneditable)

Count gave me weird result

6

I have 3 bed files to count overlapping regions. ``` # Union bedops -u test1.bed test2.bed test3.bed > union_bed_file_list_3_samples.bed # Merge bedops -m test1.bed test2.bed test.bed > merge_bed_file_list_3_samples.bed # Count...

Extract all genes within 5 kb, 10 kb of a genomic range.

1

I have a genomic region that have `chr, start and end` as a bed format. I have a gene annotation in bed format too. What is the best way to...

epiviz as genome viewer

3

Is it possible to load the bam file? I am trying to create publication quality figure for a manuscript. I have assembly data and want to show a specific locus...

Would you please tell me what goes to the file named "about.md" file? You specified that file as an option to notes script as an option to pandoc. @demis001

Zebrafish annotation

1

Could you please add Zebrafish to the list? @demis001

I am working on a package to analyze a custom array. I read the *.idat* using sesame and generated a list object with the following data.frames: ``` > names(iscan) [1]...

ant error

3

@aboyle Found the following error after cloning this git repo ``` > ant Buildfile: $HOME/bin/F-seq/build.xml prepare: [mkdir] Created dir:$HOME/bin/F-seq/build~ [mkdir] Created dir:$HOME/bin/F-seq/build~/classes [mkdir] Created dir: $HOME/bin/F-seq/dist~ compile: [javac] $HOMEa/bin/F-seq/build.xml:59: warning:...

I am trying to load gff file to mysql 8 and keep getting this error. I changed character class from utf8 to latin1 and so on nothing helped. ``` bp_seqfeature_load.pl...

The application output sam format only, the option for bam file exist but wasn't implemented. -f bam doesn't work. The sam file has an error too, Any buddy understand this...