DeepLearningLifeSciences
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deepchem
Example code from the book "Deep Learning for the Life Sciences"
https://github.com/deepchem/DeepLearningLifeSciences/blob/master/Chapter05/pdbbind_nn.py throws this error RuntimeError: expected scalar type Float but found Char
I am getting the following error from pdbbind_rf: `ValueError: Found array with 0 feature(s) (shape=(3881, 0)) while a minimum of 1 is required.` the first of the traceback is from...
Running deepchem 2.3.0 in a conda environment on ubuntu. From looking at the error by hand, it seems the url `http://deepchem.io.s3-website-us-west-1.amazonaws.com/datasets/pdbbind_v2015.tar.gz` is 403ing. Stack Trace ```` $ python3 pdbbind_nn.py Traceback...
The following PR contains the model which predicts the toxicity of the molecules.
Can you check this code and add to the repo if valid? I have added the Jupyter notebook for code in Chapter 3: Machine Learning with Deep Chem. [https://colab.research.google.com/drive/15U1awatK0a1VbkWhElgJyBtX4yTc8R-N?usp=sharing] 
This PR fixes some issues in the Chapter 11 notebooks that break them on DeepChem HEAD. However, I think these fixes would break the notebooks on DeepChem 2.3 @peastman Should...
While following the textbook and the steps on Github on the cell counting task, when I run model.restore() it throws the following error: INFO:tensorflow:Restoring parameters from model/model-7700 and NotFoundError: Restoring...
in the static function load_img() you are using SciPy.misc.imread() which is deprecated in SciPy 1.0.0, and removed in 1.2.0... and the lattes version is 1.2.2 in order for the code...
It has been a real challenge to get this to work, besides the bugs... and still trying.... I write these lines to other people that are trying to get it...
Hi there, I was trying to run the code but it does not run, in line 41 you are looking for image_names = [p for p in os.listdir(images_path)if p.startswith('cut_') and...