Damion Dooley

So I'm using the Master branch of DataHarmonizer v 1.7.0 on updated Chrome (and Macbook Air) and exporting to VirusSeq .tsv format and its definitely saving tabs. What version of...

I also tested on PathogenGenomicsPackage GitHub dataharmonizer v1.6.9 and it seems fine there too BTW.

Hi, The web/templates/new/ is a barebones template, and if you are in that folder at the command prompt you can run: > python3 ../../../script/tabular_to_schema.py -m and this will compile the...

Any followup needed? BTW, in the spring we will be launching the ability of DataHarmonizer to edit and save its own template / schema files. This will vastly simplify this...

I will close this, with a note that our upcoming release, after user review & bug fixing of dh2-rc1-rework will enable loading editing and saving of LinkML schemas / templates.

Discussed on Nov 14th call. Action items: * "**food fermentation**" needs its definition cleaned up: "A fermentation process in which either carbohydrates, proteins or fats are modified through microbial, enzymatic...

Discussed Dec 12: FoodOn will have a general fermentation definition as Magalie suggests, and then under, will be "food fermentation", but with siblings potentially in future (or now) of "alcoholic...

I've tweaked this slightly to fit Aristotelean form, influenced by GO's hierarchy: label: fermentation; defn: "**A metabolic process which transforms organic substances by various living microorganisms and the enzymes they...

I have a similar question. I can see the mirror command doing its work and successfully downloading the mirror file and creating a catalogue entry. But I don't know how...

I can't quite understand what the parameters involved in the implementation section of above document are supposed to look like so our strategy will be to implement the latest ODK...