Daniel Dimitrov

PS. Also, there is no need to implement the flag, it's simply about setting it to False, when whe resource is obtained. We don't want to include those, and I...

Hey Nico, thanks a lot. I think it should definitely be `False` to default, or at least the clients should have it as false if possible - though that might...

Hey @deeenes @Nic-Nic, It seems to me that the solution we discussed yesterday for liana, i.e. access the databases via the client, will not work if we don't filter the...

Ping @deeenes, it will become time sensitive very soon :smile:

@deeenes :eyes:

Hi @apal6, We recently made extensive protocols that would fit your complex design: https://ccc-protocols.readthedocs.io/en/latest/notebooks/ccc_R/QuickStart_pbmc.html Hope this helps.

Hi @apal6, The analysis above would support two conditions only, alternatively you could try this one (essentially doing differential contrast between post vs pre), though it's available currently only in...

Hi @jjacob12, Hmmm, could it be that you are passing non-negative values? I see CST assay is used, perhaps make sure that the values are just log-normalized counts. Also, best...

Hi @jjacob12, yeah. I'm really not sure why this is the case. I assume it has to do with calculating the final p-values for CellPhoneDB, but I cannot reproduce this...

Hi @jjacob12, daniel.dimitrov {a} uni-heidelberg.de