Daniel Dimitrov
Daniel Dimitrov
Hi @asmlgkj, This is a fair and valuable request, related to https://github.com/saezlab/liana-py/issues/56 Hopefully, we will get to it soon! In the meantime, perhaps these functions would be useful: https://github.com/saezlab/lianaplus_manuscript/blob/main/notebooks/sma/sma_plot.ipynb
Hi @fbnrst, hmm liana is not on conda. I agree it would be nice to have it there. If you want to speed things up, you can install scanpy via...
🤔🤔 hmm, sorry must've missed that during the recent cookie cutter migration. I would double check this before closing.
related: https://github.com/earmingol/cell2cell/issues/70
Hi @rmauron, It should be as simple as obtaining the resource of interest from liana and then concatenating your 20 interactions (formated the same way as the liana dataframe): ```...
Hi @RunyuXia, You cannot do it with the bivariate scores (since they are limited to two variables at a time). You could, however, sum by each cell type. I'm also...