Luca D

CRITICAL: job status reported by "cromshell list -u" is incorrect and never updates.

6

`cromshell list -u` is supposed to check completion status of all unfinished jobs. However sometimes it reports incorrect values while `cromshell status` reports the correct ones. Even after running `cromshell...

Difference in installation between brew and conda

4

brew install broadinstitute/dsp/cromshell --> does not install womtool conda install cromshell -c bioconda --> does install womtool Is that the desired behavior?

"cromshell list" gives incorrect information after a "cromshell abort" command

3

Sometimes: 1. I abort a job by their ID 1. when I run "cromshell list" I see that the job is listed as still running. 2. if I try to...

> cromshell list -u -c reports that job_id: 607c742d-9327-49b4-a621-d2a28aa48f17 is running However: > cromshell status 607c742d-9327-49b4-a621-d2a28aa48f17 reports that the job is aborted. The latter is consistent with what is reported...