tabula-sapiens

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Hi, thanks for an incredible resource! I'm trying to relate the Smart-seq BAMs to the cell annotations, but encountering problems. Namely, the gene expression vectors from the fully processed TabulaSapiens.h5ad...

davek44

normalization

1

What normalization + transformation has been applied to transform the Tabula Sapiens anndata.raw.X object to the anndata.X object?

v-mahughes

Annotations.py fails- dependency on old sklearn modules?

4

Dear, I wanted to perform annotations locally or with our cluster. So I made a new conda environment and went with the script available (for colab session) at your website...

saeedfc

Dear researchers, We want to analyze the pathologist-annotated HE slides to benchmark the sc-RNA results. Can you share the pathologist-annotated HE slides concerning the Fig.2 in your article. Thank you!

yao50985098

Chenling

1

aopisco

alignment bug fix

1

aopisco