Curtis Lisle
Curtis Lisle
It would be a nice addition if the table view of the dataset tab in Resonant Lab allowed the user to click the column heading and order the rows according...
In this session, I will demonstrate Tangelo, a rapid prototyping web application framework with a small learning curve (http://tangelo.kitware.com/ and https://tangelo.readthedocs.org/en/v0.6.1/) useful for creating and hosting dataset visualizations through public...
change ansible flow role to reference arborworkflows repo. Are there others like this?
had to add "client_max_body_size 500M" to arbor-girder in sites-available nginx config file. Had a case where a >1MB tree file wouldn't upload.
Nexus files are used often in phylogenetics. Instead of having to support our own parsers, we should adopt mature parsers if they exist. The parser below handles Nexus and Newick...
Text files should have better default interpretations if this is possible. It is suggested to interpret as TSV or CSV initially
An analysis was created which writes out a string. The string is viewable through the "visualization tab", but no type is available when trying to download it. Downloading without a...
While processing large biology matrices, I came across a "BSON too large error" as I was trying to save an in-memory table to girder. Is this a case where a...
The main page of this app, is actually the "advanced mode" according to the biologists. We need to have some links to documentation pages added here. This may be something...
I believe it was feeding a nested format tree to an R analysis expecting an APE tree, that caused a runtime problem. The romanesco log indicated a failure in "nested...