Marcus D. Hanwell

Results 29 issues of Marcus D. Hanwell

Greetings. Your program is really fantastic thanks for all your hard work. Here is the bug: When I enlarge the C axis using the super cell builder on molecules such...

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bug

I am a new used to Avogadro and am trying to import 1FIN.pdb. It crashes every time after saying "opening multi-domain molecule, this may take a while...". I've attached the...

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bug

This may be a problem with other property dialogs, too. It seems to only crash when an atom is deleted, e.g. adding new atoms works fine. To reproduce: 1) Build...

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Interface
bug

When making a molecule and using view->molecule properties, the IUPAC name is unknown when before it was fine. Even with simple molecules such as methyl. Reported by: *anonymous

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bug

(Note that this is a separate problem than I reported in PR#2887942, where the "View/All Molecules in File" remained greyed out) Avogadro successfully opens the attached file, and lists the...

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Interface
bug

This isn't perfectly replicable. At first I thought it happened when I tried to view molecular properties without saving, but I tried to repeat it before submitting this bug report...

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bug

Hi whenI use the unitcell builder to add several copies of the same unitcell The nice looking result is not exported in povray. povray only renders a single unit cell....

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Rendering
bug

From Steven Wathen on the mailing list: The highest energy conformer listed (View-Properties-Conformer properties) has an energy of 1190 !! As it turns out, this is the lowest energy conformer...

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bug

This may be a documentation issue, but the way I think I am supposed to use the animation feature is to (1) load the multi-structure xyz file with open, (2)...

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Commands / Extensions
bug

If you open a current file to edit, you cannot "Save As" to a new filename. The file is always saved to the original filename. Reported by: @ghutchis

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Interface
bug