Cornelius Roemer
Cornelius Roemer
### Context I was surprised to find that the (long) CLI args of Auspice are camel case rather than kebab case, as is conventional for CLIs ### Description Switch to...
As a heavy keyboard user I'd love Auspice to support more power-user features like keyboard-only filtering. Right now, ctrl+f just triggers the normal browser `find` function. I think it would...
The mpox genemap is very dense. It's hard to read gene names in the genemap part of the entropy panel. The white gene names also seem to overflow into neighbouring...
### Context Our SARS-CoV-2 builds are usually heavily subsampled. When one finds a small cluster in a tree, it's currently not easy to find out whether that cluster made it...
### Current Behavior I've noticed some visual imperfections with branches overshooting the left stem slightly. The issue occurs only sometimes without any clear changes from my end. ### Expected behavior...
ENH: Make it easy to see branches with reversions, without needing to hover, e.g. colouring or label
### Current Behavior Since Auspice 2.33.0, the tooltips show the number of reversions that occur on a branch. That's great, and nice to know when inspecting a branch. ### Problem...
**Current Behavior** About every 10-20min browsing Auspice trees with ~3000-4000 genomes my whole Brave browser will hang infinitely when I zoom into a branch. This doesn't happen on every branch...
**Context** Currently, when no explicit color scale is provided through colors.tsv, Auspice auto-generates a scale. If I'm not mistaken, this scale is a linear interpolation between min and max values...
**Context** Reference backfilling is a big problem in SARS-CoV-2 sequences. All the information one needs to identify reversions back to reference is included in the auspice.json. This would for example...
When glancing through Auspice docs, I noticed that there seems to be no clearly advertised link to auspice.us Auspice.us is the easiest way to use Auspice for most users so...