christopher-vollmers

paftools.js to convert STAR sam files?

2

Hi, I apologize if this is an "off label" use case. I am trying to convert a STAR sam to a paf file using paftools.js I am doing this to...

pair decoding of R2C2 data

1

Hi, I am very interested in experimenting with the pair decoding of bonito for our R2C2 data. Two questions: 1) Is there still a way to produce .npy files required...

-S option for pyabpoa

2

Hi, My lab's Mandalorion and C3POa tools use pyabpoa and it works great. Just every once in a while, we encounter an overlong sequence and pyabpoa stalls for a very...

Tabula Sapiens Atlases

1

Hi Fabio, I hope you and doing well (and still monitoring this repository). I'm trying to generate Atlases from the Tabula Sapiens h5ad files that you can download from figshare....