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-S option for pyabpoa

Open christopher-vollmers opened this issue 1 year ago • 2 comments

Hi,

My lab's Mandalorion and C3POa tools use pyabpoa and it works great. Just every once in a while, we encounter an overlong sequence and pyabpoa stalls for a very long time.

I've noticed that abpoa has the -S option to do seeded alignment, potentially using a lot less memory in the process. Is that option available for pyabpoa as well? I can't seem to find that info.

Thank you, Chris

christopher-vollmers avatar Apr 16 '23 22:04 christopher-vollmers