chelseaju

from protein sequence to training data

7

Hi, We would like to try out your code to predict PPI; however, we are having trouble understanding the input format. Given two lists of protein sequences (positive and negative...

Querying upstream and downstream (including 5'UTR and 3'UTR)

1

Hi, Thanks for making this software available on Github. It is a very great tool, which makes my life easier to retrieve the genomic position when looking at variations. I...

Bug in AddAncestors.pl

1

https://github.com/bio-ontology-research-group/onto2vec/blob/7402b8a47d11087a4d764d52bc2a0918de2e1697/AddAncestors.pl#L34 Currently, AddAncestors.pl is not including all of the ancestors of a GO term. The $newline variable is redefined with an empty value. This need to be fixed by removing...