Michele Ceriotti
Michele Ceriotti
Just to give some context, I was testing the implementation of a direct PLUMED call from i-PI based on the Python bindings, and I noticed that simulations were not reproducible...
If we start fiddling with the format, it might be good to standardize a bit, and to have a "version" field to make sure that the viewer is aware of,...
Hi Joe, I think @Luthaf is much more likely to be able to help. If you succeed in this, it would be really cool to also expose this functionality for...
Thanks Rose. Looks very nice in 2D. The 3D version though is not so great  is there a fundamental reason? Should we just disable opacity in 3D?
I think this could/should go hand-in-hand with the highlighting of the "clickable" atoms in the JSMolWidget. When in environment mode, one should see all the environments highlighted in the JSMolWidget,...
Why do you say that this wouldn't work in 3D? seems it's enough to set trace opacity to 0.99999 and then it honors the alpha channel https://github.com/plotly/plotly.js/issues/3492 On Thu, 27...
Mentioned in PR #144
would make sense to only do this after we converge on jsmol vs 3dmol.js though On Thu, 15 Apr 2021 at 18:33, Guillaume Fraux ***@***.***> wrote: > This is a...
@jduerholt Want to help?
Screenshot 