Corey Broeckling

Thanks @joranier. There should have been no updates on this computer during this processing, but i will see if i can conform or refute that. I deliberately avoid trying to...

@stanstrup - 'crazy' is about right. This computer seems a bit sluggish these days, but i don't think it is a memory issue - i keep an eye on that....

My current best theory is here: https://stackoverflow.com/questions/51935894/local-shiny-app-crashes-after-temporary-directory-gets-deleted Windows Disk Cleanup seems the most likely culprit. Unfortunately, this is an error that i can't troubleshoot quickly, as it just takes a...

just wanted to tack a general question onto this thread. It seems to me that the memory demands of XCMS3 are larger than they were in the original configuration. Does...

@jorainer - thanks for the _great_ response. I expect that my observations are largely derived from the fact that i am on windows, using Snow, based on your description. Clearly...

@Phylloxera @Sukis123 The approach I am using (now) is below on windows. The point at which you want to incorporate MSe files as at the very first step. readMSData(files =...

you should not need to coerce the xcms structure for ramclustR - it should take the new format as input directly and yes - I think you will need the...

lets do move over to rhe ramclustR GitHub for this question. thanks. C

Thanks @jorainer and @sneumann. Good tips! I will chew on this info for a while and start talking to our local IT support.

i have accessed a linux server - 48 cores, 256 GB RAM. I am doing some benchmarking just using peak detection (centwave) for now. With reference to the above -...