cbio-astar

Can you check for entropy whether we are using entropy.empirical with default fixed bin size? The bin size should not be fixed across all dataset, it has to follow Doan’s...

For heatmap, what is the use for fold change or minimum column? If I change this, nothing changes

Also for PCA, when I choose the top 50, or 100, etc. the PCA plots do not change. They remain the same as the whole data. That is, they are...

For PCA, the default is using all genes. The number I see for my data is 15077, when It should be 55000+. What happened to the remaining genes? Are they...

PCA 3-D is unable to rotate.

Correlation should have a plot with samples or time as we often use in our papers. Giving the heatmap for correlation plot is not useful as it is a repeat...

When I download to pdf, it generates html and inside the file says “An error has occurred”

I tried scatter plot collage, it took forever and stopped

we DO NOT need to submit right? So, can we remove the Submit button for this?

For the import, we need to remove the gene ID column. So if we directly import from GEO, will the loading automatically remove this column?