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Published 20 hours ago • verified publisher icon cbg-ethz
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Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.

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update com.google.guava

1 comment

[update of guava](https://github.com/advisories/GHSA-mvr2-9pj6-7w5j) is needed.

DrYak avatar DrYak

optimizing the settings for HIV

Hi, I am using ConsensusFixer to get FL consensi from cleaned bam reads covering HIV FL genome (MiSeq Illumina) One limitation is that coverage can be very heterogeneous or incomplete...

antoine4ucsd avatar antoine4ucsd

null in consensus sequence

4 comment

Using the newest version 0.3.1 with or without a reference sequence I found some `null` strings in the consensus sequence. Also I do not get any `N`s, even if I...

tolot27 avatar tolot27

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verified publisher icon cbg-ethz

Metadata

Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.

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