cbaakman

I've noticed this too on forge minecraft 1.7.10, terraincontrol-forge-2.6.3

I would like to have the option to select the chain IDs in. https://github.com/DeepRank/pdb2sql/blob/76d7b684b6921261436e2656d9ecd8be86148199/pdb2sql/StructureSimilarity.py#L531 Right now, it always picks the first two.

I managed to make it work by changing the config settings from ``` tropicraft { M:modID=tropicraft S:axeIDList= S:shearsIDList= # This setting controls whether or not the mod config section it...

I simply installed the invironment from the repo: ``` conda env create -f env/SE3nv.yml ``` I don't remember which exact package was the cause.

> Is this still an issue? Did we take any decisions here? @cbaakman No decisions were made on this topic yet.

Deeprank does not keep track of the orders of nodes or edges when building a graph. These are simply stored as a python dictionary. Why the order is different every...

Having the real graph in the hdf5 file would be an option indeed. In such case one would have to change 2 functions: the graph_to_hdf5 writer and the hdf5_to_graph reader.